Table 3 Percentage nucleotide sequence identity between the complete sequences of alphasatellite isolate OM3 with selected alphasatellites in the database
Isolates | TbLCPuA-2 | GDaSA-4 | MeMA-3 | HLCuA-2 | SiYVA-4 | CaMMGA-3 | MalYVMA-2 | MalYVA-3 | CLCuMA-8 | OM3 |
|---|---|---|---|---|---|---|---|---|---|---|
OM3 | 84.5–84.7 | 81.2–81.8 | 86.3–86.4 | 81.2–82.5 | 80.5–80.6 | 76.8–76.9 | 81.0–81.2 | 77.5–78.0 | 93.2–97.9 | 100 |
CLCuMA | 84.2–86.8 | 81.7–82.8 | 86.1–87.5 | 82.1–83.1 | 78.8–81.9 | 76.1–77.7 | 81.0–82.1 | 78.1–80.8 | 100 | |
MalYVA | 80.3–80.6 | 80.2–81.5 | 80.2–80.7 | 79.0–80.4 | 83.5–84.3 | 73.5–74.2 | 85.7–86.2 | 100 | ||
MalYVMA | 80.3–80.9 | 81.7–82.0 | 81.2–81.4 | 79.4–81.6 | 82.2–82.6 | 73.8–74.2 | 100 | |||
CaMMGA | 77.1–77.5 | 74.4–76.0 | 75.4–75.8 | 76.8–77.1 | 76.1–76.5 | 100 | ||||
SiYVA | 84.2–84.5 | 82.1–82.3 | 83.3–84.1 | 84.7–86.3 | 100 | |||||
HLCuA | 85.9–89.7 | 78.1–80.7 | 82.2–83.4 | 100 | ||||||
MeYMA | 82.1–82.2 | 82.1–82.4 | 100 | |||||||
GDaSA | 79.7–79.9 | 100 | ||||||||
TbLCPuA | 100 |