Genetic diversity among different geographical isolates of the gram pod borer, Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) nucleopolyhedrosis virus (HearNPV)

Singh, Ranvir; Jagadish, K. S.; Tak, Kheta Ram; Peter, Anitha

doi:10.1186/s41938-019-0164-2

Egyptian Journal of Biological Pest Control

Table 3 Pairwise genetic distance between the polyhedrin nucleotide/deduced amino acid sequences of HearNPV isolates from different geographical regions (the numbers above the diagonal line indicate the amino acid genetic distance, while numbers below the diagonal line indicate nucleotide genetic distance)

From: Genetic diversity among different geographical isolates of the gram pod borer, Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) nucleopolyhedrosis virus (HearNPV)

		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36
1	Jod-In		0.0000	0.0121	0.0121	0.0120	0.0120	0.0060	0.0060	0.0060	0.0000	0.0060	0.0119	0.0060	0.0120	0.0060	0.0119	0.0121	0.0060	0.0060	0.0060	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0060	0.0060	0.0060	0.0060	0.0060	0.0120	0.0060	0.0060	0.0060
2	Lud-PAU-In	0.0000		0.0121	0.0121	0.0120	0.0120	0.0060	0.0060	0.0060	0.0000	0.0060	0.0119	0.0060	0.0120	0.0060	0.0119	0.0121	0.0060	0.0060	0.0060	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0060	0.0060	0.0060	0.0060	0.0060	0.0120	0.0060	0.0060	0.0060
3	Lud-I-In	0.0080	0.0080		0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0121	0.0060	0.0120	0.0060	0.0121	0.0060	0.0120	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060
4	Lud-II-In	0.0080	0.0080	0.0000		0.0060	0.0060	0.0060	0.0060	0.0060	0.0121	0.0060	0.0120	0.0060	0.0121	0.0060	0.0120	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060
5	Bat-In	0.0020	0.0020	0.0060	0.0060		0.0060	0.0060	0.0060	0.0060	0.0120	0.0060	0.0119	0.0060	0.0120	0.0060	0.0119	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060
6	Far-I-In	0.0040	0.0040	0.0060	0.0060	0.0020		0.0060	0.0060	0.0060	0.0120	0.0060	0.0120	0.0060	0.0121	0.0060	0.0120	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060
7	Far-II-In	0.0020	0.0020	0.0060	0.0060	0.0000	0.0020		0.0000	0.0000	0.0060	0.0000	0.0060	0.0000	0.0060	0.0000	0.0059	0.0060	0.0000	0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
8	Dhl-In	0.0080	0.0080	0.0040	0.0040	0.0060	0.0080	0.0060		0.0000	0.0060	0.0000	0.0060	0.0000	0.0060	0.0000	0.0059	0.0060	0.0000	0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
9	Akl-In	0.0100	0.0100	0.0060	0.0060	0.0080	0.0100	0.0080	0.0020		0.0060	0.0000	0.0060	0.0000	0.0060	0.0000	0.0059	0.0060	0.0000	0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
10	His-HAU-In	0.0000	0.0000	0.0080	0.0080	0.0020	0.0040	0.0020	0.0080	0.0100		0.0060	0.0119	0.0060	0.0120	0.0060	0.0119	0.0121	0.0060	0.0060	0.0060	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	00060	0.0060	0.0060	0.0060	0.0060	0.0120	0.0060	0.0060	0.0060
11	Pal-In	0.0020	0.0020	0.0060	0.0060	0.0000	0.0020	0.0000	0.0060	0.0080	0.0020		0.0060	0.0000	0.0060	0.0000	0.0059	0.0060	0.0000	0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
12	Hyd-In	0.0121	0.0121	0.0080	0.0080	0.0100	0.0121	0.0100	0.0040	0.0060	0.0121	0.0100		0.0060	0.0120	0.0060	0.0119	0.0120	0.0060	0.0060	0.0060	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	00060	0.0060	0.0060	0.0060	0.0060	0.0120	0.0060	0.0060	0.0060
13	Udr-In	0.0080	0.0080	0.0040	0.0040	0.0060	0.0080	0.0060	0.0000	0.0020	0.0080	0.0060	0.0040		0.0060	0.0000	0.0059	0.0060	0.0000	0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
14	Rke-In	0.0060	0.0060	0.0060	0.0060	0.0040	0.0060	0.0040	0.0060	0.0080	0.0060	0.0040	0.0100	0.0060		0.0060	0.0120	0.0121	0.0060	0.0060	0.0060	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	0.0120	00060	0.0060	0.0060	0.0060	0.0060	0.0120	0.0060	0.0060	0.0060
15	Chan-In	0.0080	0.0080	0.0040	0.0040	0.0060	0.0080	0.0060	0.0000	0.0020	0.0080	0.0060	0.0040	0.0000	0.0060		0.0059	0.0060	0.0000	0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
16	Gul-In	0.0100	0.0100	0.0060	0.0060	0.0080	0.0100	0.0080	0.0020	0.0040	0.0100	0.0080	0.0060	0.0020	0.0080	0.0020		0.0120	0.0059	0.0059	0.0059	0.0119	0.0119	0.0119	0.0119	0.0119	0.0119	0.0119	00059	0.0059	0.0059	0.0059	0.0059	0.0119	0.0059	0.0059	0.0059
17	Ban-In	0.0080	0.0080	0.0000	0.0000	0.0060	0.0060	0.0060	0.0040	0.0060	0.0080	0.0060	0.0080	0.0040	0.0060	0.0040	0.0060		0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060
18	Ban-L1-NBAIR-In	0.0080	0.0080	0.0040	0.0040	0.0060	0.0080	0.0060	0.0000	0.0020	0.0080	0.0060	0.0040	0.0000	0.0060	0.0000	0.0020	0.0040		0.0000	0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
19	Ban-PDBC-In	0.0060	0.0060	0.0100	0.0100	0.0040	0.0060	0.0040	0.0100	0.0121	0.0060	0.0040	0.0141	0.0100	0.0080	0.0100	0.0121	0.0100	0.0100		0.0000	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
20	Hor-In	0.0080	0.0080	0.0040	0.0040	0.0060	0.0080	0.0060	0.0000	0.0020	0.0080	0.0060	0.0040	0.0000	0.0060	0.0000	0.0020	0.0040	0.0000	0.0100		0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	0.0060	00000	0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
21	1113-Neg-In	0.0060	0.0060	0.0060	0.0060	0.0040	0.0040	0.0040	0.0100	0.0121	0.0060	0.0040	0.0141	0.0100	0.0080	0.0100	0.0121	0.0060	0.0100	0.0080	0.0100		0.0000	0.0000	0.0000	0.0000	0.0000	0.0000	00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
22	2588-Neg-In	0.0060	0.0060	0.0060	0.0060	0.0040	0.0040	0.0040	0.0100	0.0121	0.0060	0.0040	0.0141	0.0100	0.0080	0.0100	0.0121	0.0060	0.0100	0.0080	0.0100	0.0000		0.0000	0.0000	0.0000	0.0000	0.0000	00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
23	1073-Ch	0.0120	0.0120	0.0121	0.0121	0.0100	0.0100	0.0100	0.0162	0.0182	0.0120	0.0100	0.0203	0.0162	0.0141	0.0162	0.0182	0.0121	0.0162	0.0141	0.0162	0.0100	0.0100		0.0000	0.0000	0.0000	0.0000	00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
24	1625-Ch	0.0120	0.0120	0.0121	0.0121	0.0100	0.0100	0.0100	0.0162	0.0182	0.0120	0.0100	0.0203	0.0162	0.0141	0.0162	0.0182	0.0121	0.0162	0.0141	0.0162	0.0100	0.0100	0.0000		0.0000	0.0000	0.0000	00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
25	3010-Ch	0.0080	0.0080	0.0080	0.0080	0.0060	0.0060	0.0060	0.0121	0.0141	0.0080	0.0060	0.0162	0.0121	0.0100	0.0121	0.0141	0.0080	0.0121	0.0100	0.0121	0.0060	0.0060	0.0040	0.0040		0.0000	0.0000	00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
26	1186-SA	0.0120	0.0120	0.0121	0.0121	0.0100	0.0100	0.0100	0.0162	0.0182	0.0120	0.0100	0.0203	0.0162	0.0141	0.0162	0.0182	0.0121	0.0162	0.0100	0.0162	0.0100	0.0100	0.0121	0.0121	0.0080		0.0000	00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
27	75-Sud	0.0040	0.0040	0.0040	0.0040	0.0020	0.0020	0.0020	0.0080	0.0100	0.0040	0.0020	0.0121	0.0080	0.0060	0.0080	0.0100	0.0040	0.0080	0.0060	0.0080	0.0020	0.0020	0.0080	0.0080	0.0040	0.0080		00060	0.0060	0.0060	0.0060	0.0060	0.0000	0.0060	0.0060	0.0060
28	LB1-Sp	0.0080	0.0080	0.0121	0.0121	0.0060	0.0080	0.0060	0.0121	0.0141	0.0080	0.0060	0.0162	0.0121	0.0100	0.0121	0.0141	0.0121	0.0121	0.0060	0.0121	0.0100	0.0100	0.0162	0.0162	0.0121	0.0080	0.0080		0.0000	0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
29	LB3-Sp	0.0040	0.0040	0.0080	0.0080	0.0020	0.0040	0.0020	0.0080	0.0100	0.0040	0.0020	0.0121	0.0080	0.0060	0.0080	0.0100	0.0080	0.0080	0.0060	0.0080	0.0060	0.0060	0.0121	0.0121	0.0080	0.0121	0.0040	0.0080		0.0000	0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
30	LB6-Sp	0.0040	0.0040	0.0080	0.0080	0.0020	0.0040	0.0020	0.0080	0.0100	0.0040	0.0020	0.0121	0.0080	0.0060	0.0080	0.0100	0.0080	0.0080	0.0060	0.0080	0.0060	0.0060	0.0121	0.0121	0.0080	0.0121	0.0040	0.0080	0.0000		0.0000	0.0000	0.0060	0.0000	0.0000	0.0000
31	SP1A-Sp	0.0100	0.0100	0.0141	0.0141	0.0080	0.0100	0.0080	0.0141	0.0162	0.0100	0.0080	0.0183	0.0141	0.0121	0.0141	0.0162	0.0141	0.0141	0.0040	0.0141	0.0121	0.0121	0.0141	0.0141	0.0100	0.0100	0.0100	0.0100	0.0100	0.0100		0.0000	0.0060	0.0000	0.0000	0.0000
32	SP1B-Sp	0.0080	0.0080	0.0121	0.0121	0.0060	0.0080	0.0060	0.0121	0.0141	0.0080	0.0060	0.0162	0.0121	0.0100	0.0121	0.0141	0.0121	0.0121	0.0020	0.0121	0.0100	0.0100	0.0121	0.0121	0.0080	0.0080	0.0080	0.0080	0.0080	0.0080	0.0020		0.0060	0.0000	0.0000	0.0000
33	138-Pol	0.0040	0.0040	0.0040	0.0040	0.0020	0.0020	0.0020	0.0080	0.0100	0.0040	0.0020	0.0121	0.0080	0.0060	0.0080	0.0100	0.0040	0.0080	0.0060	0.0080	0.0020	0.0020	0.0080	0.0080	0.0040	0.0080	0.0000	0.0080	0.0040	0.0040	0.0100	0.0080		0.0060	0.0060	0.0060
34	Aus	0.0060	0.0060	0.0100	0.0100	0.0040	0.0060	0.0040	0.0100	0.0121	0.0060	0.0040	0.0141	0.0100	0.0080	0.0100	0.0121	0.0100	0.0100	0.0080	0.0100	0.0080	0.0080	0.0060	0.0060	0.0100	0.0141	0.0060	0.0100	0.0060	0.0060	0.0121	0.0100	0.0060		0.0000	0.0000
35	AC53-Aus	0.0060	0.0060	0.0100	0.0100	0.0040	0.0060	0.0040	0.0100	0.0121	0.0060	0.0040	0.0141	0.0100	0.0080	0.0100	0.0121	0.0100	0.0100	0.0040	0.0100	0.0040	0.0040	0.0141	0.0141	0.0100	0.0100	0.0060	0.0060	0.0060	0.0060	0.0080	0.0060	0.0060	0.0080		0.0000
36	H25EA1-Aus	0.0040	0.0040	0.0080	0.0080	0.0020	0.0040	0.0020	0.0080	0.0100	0.0040	0.0020	0.0121	0.0080	0.0060	0.0080	0.0100	0.0080	0.0080	0.0060	0.0080	0.0020	0.0020	0.0121	0.0121	0.0080	0.0121	0.0040	0.0080	0.0040	0.0040	0.0100	0.0080	0.0040	0.0060	0.0020

Back to article page