Table 3 Percent similarity of the bacterial isolates with their closely related species based on the BLAST searches in NCBI GanBank database (Altschul et al. 1990)
Isolate | Bacterial species | GenBank accession number | Query cover (%) | Similarity (%) | VITEK2 (%) |
|---|---|---|---|---|---|
Cp1 | Pseudomonas sp. PDD-59b-7 Pseudomonas sp. R3ScM3P1C11 Pseudomonas syringae strain PDD-48b-5 | KR922145 KF147001 KR922059 | 96 96 96 | 99 99 99 | Lysinibacillus sphaericus/Lysinibacillus fusiformis (91) |
Cp2 | Corynebacterium variabile strain C3-13 Corynebacterium sp. ZT10-3 Corynebacteriumvariabile DSM 44702 | KP114214 KT597082 NR102874 | 96 96 96 | 96 96 96 | Gardnerella vaginalis (93) |
Cp3 | Pseudomonas sp. MN11-3 Pseudomonas matsuisoli strain CC-MHH0089 Pseudomonas matsuisoli strain CC-MHH0089 | JQ396614 NR134793 KJ720680 | 97 97 97 | 96 96 96 | Dermacoccus nishinomiyaensis/Kytococcus sedentarius (96) |
Cp4 | Bacterium BEL C12 Bacillus sp. 13K7a2 Bacillus sp. 7Kp1a Bacillus pumilus strain OU101 | KT382407 KT825840 KT825839 KR140377 | 96 96 96 96 | 99 99 99 99 | Lysinibacillus sphaericus/Lysinibacillus fusiformis (87) |
Cp5 | Pseudomonas matsuisoli strain CC-MHH0089 Pseudomonas matsuisoli strain CC-MHH0089 Pseudomonas sp. RBSB9_C3 | NR134793 KJ720680 KT390731 | 97 97 96 | 96 96 97 | Aeromonas salmonicida (98) |
Cp6 | Pectobacterium carotovorum subsp. brasiliense strain Y45 16S Pectobacterium carotovorum subsp. brasiliense strain Y34 16S Pectobacterium carotovorum subsp. brasiliense strain Y33 16S | KP187510 KP187504 KP187503 | 98 98 98 | 97 97 97 | Unidentified organism |
Cp7 | Bacillus sp. BG2-9 Bacillus pumilus strain T246 Bacillus pumilus strain ML353 | KP992115 KC764989 KC692160 | 98 99 99 | 97 97 97 | Bacillus pumilus (85) |
Cp8 | Paenibacillus sp. MOLA 507 Bacterium UKR A17 Paenibacillus sp. S8 | AM990732 KT382376 KR051059 | 96 96 96 | 97 97 97 | Paenibacillus polymyxa (90) |
Cp9 | Bacillus sp. 210_50 Bacillus sp. strain RHH15 Bacillus sp. L11(2010) | GQ199752 HQ143613 HQ222333 | 99 99 99 | 96 96 96 | Bacillus pumilus (86) |
Cp10 | Bacillus pumilus strain X22 Bacillus pumilus strain HN-30 Bacillus pumilus strain HN-10 | FJ763645 KT003271 KT003256 | 99 99 99 | 98 98 98 | Bacillus pumilus (88) |
Cp11 | Bacillus megaterium strain D5 Bacillus megaterium strain BCRh8 Bacillus megaterium strain BS9 | KC441754 KT153604 KR063189 | 99 99 99 | 98 98 98 | Bacillus megaterium (87) |
Cp12 | Bacillus sp. C26(2014) Bacillussubtilis strain L-13 Bacillustequilensis strain YJ-S4 | KM117217 HQ232422 KF876849 | 99 99 99 | 99 99 99 | Unidentified organism |
Cp13 | Pseudomonas sp. BE07 Uncultured bacterium isolate 1112863845131 Pseudomonas sp. DR11(2011) | AY456700 HQ121073 JN210571 | 97 97 97 | 96 96 96 | Aeromonas salmonicida (97) |
Cp14 | Bacillus pumilus strain ZA13 Bacillus pumilus strain LX11 Bacillus pumilus strain Y13 | FJ263042 KP192031 KF641806 | 98 98 98 | 99 99 99 | Unidentified organism |
Cp15 | Bacillus subtilis strain L-13 Bacillus subtilis strain YA4BZ Bacillus sp. RKZ11262 | HQ232422 JQ346075 EU835569 | 98 98 98 | 99 99 99 | Unidentified organism |
Cp16 | Terribacillus saccharophilus strain MER_108 Terribacillus saccharophilus strain JP44SK46 Terribacillus saccharophilus strain WA2-4 | KT719683 JX155763 JF496471 | 96 96 96 | 96 96 96 | Unidentified organism |